PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC7BG035620.3

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

NAC

Protein Properties

Length: 460aa MW: 49914.7 Da PI: 7.7776

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC7BG035620.3	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	167.9	3.5e-52	73	201	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk..kvka.eekewyfFskrdkkyatgkrknratksgyWkatgkdk 90 +ppGfrFhPt+eel+++yL+kkv++++++l +vi++vd++k+ePwd+++ k+ + +++wyfFs++dkky+tg+r+nrat++g+Wkatg+dk TRIDC7BG035620.3 73 VPPGFRFHPTEEELLNYYLRKKVASEEIDL-DVIRDVDLNKLEPWDIQErcKIGSgPQNDWYFFSHKDKKYPTGTRTNRATAAGFWKATGRDK 164 69**************************.9***********963444443456****************************** PP NAM 91 evlskkgelvglkktLvfykgrapkgektdWvmheyrl 128 ++++ + +g++ktLvfykgrap+g+k+dW+mheyrl TRIDC7BG035620.3 165 AIYN-AVKRIGMRKTLVFYKGRAPHGQKSDWIMHEYRL 201 .8899*************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 460 aa Download sequence
PFLPQRRITH SLLASSPPQL QALAPIYLPL SAHLPAFNTR TQSTGPWKNH FTQAVVLSID 60 LAMSISVNGQ SCVPPGFRFH PTEEELLNYY LRKKVASEEI DLDVIRDVDL NKLEPWDIQE 120 RCKIGSGPQN DWYFFSHKDK KYPTGTRTNR ATAAGFWKAT GRDKAIYNAV KRIGMRKTLV 180 FYKGRAPHGQ KSDWIMHEYR LDDPSSTTDA APTATMVVSA ATSSDAGQED GWVVCRVFKK 240 KHHHKDAGAG SGKRGGGGRD DGGKAARSSS PLYSSDDALD QILHYMGRSC KQEHELSSPR 300 PRTAASRYLR PLETVLDGHG FMKLPALESP SAAATARTST TTPLAPSGDG NVERELAHAE 360 DLHQPHRDGG ITDWAMMDRL VASHLNGQHD ASTDQLCFDG TAGHTGGNDA LNDTAVNGLA 420 YYSAAATRLL GGAAAGSSDG DLWSFARSAA SSELLSHVSP

Sequence ? help Back to Top

Protein Sequence Length: 460 aa Download sequence

PFLPQRRITH SLLASSPPQL QALAPIYLPL SAHLPAFNTR TQSTGPWKNH FTQAVVLSID  60
LAMSISVNGQ SCVPPGFRFH PTEEELLNYY LRKKVASEEI DLDVIRDVDL NKLEPWDIQE  120
RCKIGSGPQN DWYFFSHKDK KYPTGTRTNR ATAAGFWKAT GRDKAIYNAV KRIGMRKTLV  180
FYKGRAPHGQ KSDWIMHEYR LDDPSSTTDA APTATMVVSA ATSSDAGQED GWVVCRVFKK  240
KHHHKDAGAG SGKRGGGGRD DGGKAARSSS PLYSSDDALD QILHYMGRSC KQEHELSSPR  300
PRTAASRYLR PLETVLDGHG FMKLPALESP SAAATARTST TTPLAPSGDG NVERELAHAE  360
DLHQPHRDGG ITDWAMMDRL VASHLNGQHD ASTDQLCFDG TAGHTGGNDA LNDTAVNGLA  420
YYSAAATRLL GGAAAGSSDG DLWSFARSAA SSELLSHVSP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G46770.1	2e-94	NAC family protein

Link Out ? help Back to Top
Ensembl	TRIDC7BG035620.3