PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC7BG038560.4

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

NAC

Protein Properties

Length: 372aa MW: 41428.8 Da PI: 7.1067

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC7BG038560.4	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	167.3	5.2e-52	10	140	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk..kvka.eekewyfFskrdkkyatgkrknratksgyWkatgkdk 90 +ppGfrFhPtdeel+ +yL+kkv+ + ++l +vi+e+d++k+ePwdL+ ++ + ++ewyfFs++dkky+tg+r+nrat++g+Wkatg+dk TRIDC7BG038560.4 10 VPPGFRFHPTDEELLYYYLRKKVAYEAIDL-DVIREIDLNKLEPWDLKDrcRIGTgPQNEWYFFSHKDKKYPTGTRTNRATTAGFWKATGRDK 101 69**************************.9***********943444442456****************************** PP NAM 91 evlsk.kgelvglkktLvfykgrapkgektdWvmheyrl 128 +++ + + +g++ktLvfy grap+g+ktdW+mheyrl TRIDC7BG038560.4 102 AIFLGsGARRIGMRKTLVFYVGRAPHGKKTDWIMHEYRL 140 9756778**************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 372 aa Download sequence
MHPSGGALSV PPGFRFHPTD EELLYYYLRK KVAYEAIDLD VIREIDLNKL EPWDLKDRCR 60 IGTGPQNEWY FFSHKDKKYP TGTRTNRATT AGFWKATGRD KAIFLGSGAR RIGMRKTLVF 120 YVGRAPHGKK TDWIMHEYRL DEDNVEVQED GWVVCRVFTK KSYTRGMNPA GMAGYDDDEL 180 LHPFPVPSSA AGAMQMITDQ KHIMHSPGHL MQQQQQQHYD FPSFDASMQL PQLMSAEHEQ 240 QTLSSFLPGA PAAVAMSSHE LECSQNLMKL TSSGTNGMLH HGGSGGGGGG DPRFPGTDWS 300 ILDKLLASHQ NLDQLFQGKV AAAAAAASMA PYQQQHQQQL MEQLGGGSTS SMQRMPLQYL 360 GCEAADLLRF SK

Sequence ? help Back to Top

Protein Sequence Length: 372 aa Download sequence

MHPSGGALSV PPGFRFHPTD EELLYYYLRK KVAYEAIDLD VIREIDLNKL EPWDLKDRCR  60
IGTGPQNEWY FFSHKDKKYP TGTRTNRATT AGFWKATGRD KAIFLGSGAR RIGMRKTLVF  120
YVGRAPHGKK TDWIMHEYRL DEDNVEVQED GWVVCRVFTK KSYTRGMNPA GMAGYDDDEL  180
LHPFPVPSSA AGAMQMITDQ KHIMHSPGHL MQQQQQQHYD FPSFDASMQL PQLMSAEHEQ  240
QTLSSFLPGA PAAVAMSSHE LECSQNLMKL TSSGTNGMLH HGGSGGGGGG DPRFPGTDWS  300
ILDKLLASHQ NLDQLFQGKV AAAAAAASMA PYQQQHQQQL MEQLGGGSTS SMQRMPLQYL  360
GCEAADLLRF SK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G79580.1	1e-95	NAC family protein

Link Out ? help Back to Top
Ensembl	TRIDC7BG038560.4