PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC7BG039840.3

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

CPP

Protein Properties

Length: 485aa MW: 52705.1 Da PI: 7.8798

Description

CPP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC7BG039840.3	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCR	43.9	4.7e-14	58	97	2	42
TCR 2 ekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNkeek 42 +kk+CnCk+s+Clk+YCeCfaag +C+ C+C++C Nk e+ TRIDC7BG039840.3 58 RKKQCNCKNSHCLKLYCECFAAGLYCDG-CNCKQCGNKVEN 97 689***********************.******9875 PP
2	TCR	50.4	4.5e-16	140	179	1	40
TCR 1 kekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNke 40 k++kgC+Ckks ClkkYCeCf+a+ Cs++CkC dCkN e TRIDC7BG039840.3 140 KHNKGCHCKKSGCLKKYCECFQANILCSKNCKCMDCKNFE 179 589***********************************65 PP

Sequence ? help Back to Top
Protein Sequence Length: 485 aa Download sequence
MEPEKQHNAQ PPAPPAAAPP QPRAVAPAHP LMHSARWPVS FTPIKPVVEI KSVTPPKRKK 60 QCNCKNSHCL KLYCECFAAG LYCDGCNCKQ CGNKVENEHA RQEAINSTKL RNPKAFQPKI 120 ENVPSTLSVR KDAGAPSVPK HNKGCHCKKS GCLKKYCECF QANILCSKNC KCMDCKNFEG 180 SEELQAIIQG DNASDKNNVQ QAANVTLNGA IGSSGYKYSP VRRKRHPEDP LGPEANHLDA 240 SQVASSSGLE GCIGYQSRSK MVYRSPLANT IHPTDVNDLA NHLVIVCRKA TETFLTIADN 300 KVEMEVERGI YTNADLNNDK MKNREVQNGG VSQPDVATHI DQRTAGDLES PCNNTQEDYR 360 PASPGTQALL CDEQGTAFGS DYRTSFPSAF YDQDTPELSA LQEKTVLTGF RDYLRLLITR 420 GKINANNSAG MTEANTSSEP AMELDARRNH GATTGPGVSS LPSEAVERPK APGGPENPRT 480 SDPSA

Sequence ? help Back to Top

Protein Sequence Length: 485 aa Download sequence

MEPEKQHNAQ PPAPPAAAPP QPRAVAPAHP LMHSARWPVS FTPIKPVVEI KSVTPPKRKK  60
QCNCKNSHCL KLYCECFAAG LYCDGCNCKQ CGNKVENEHA RQEAINSTKL RNPKAFQPKI  120
ENVPSTLSVR KDAGAPSVPK HNKGCHCKKS GCLKKYCECF QANILCSKNC KCMDCKNFEG  180
SEELQAIIQG DNASDKNNVQ QAANVTLNGA IGSSGYKYSP VRRKRHPEDP LGPEANHLDA  240
SQVASSSGLE GCIGYQSRSK MVYRSPLANT IHPTDVNDLA NHLVIVCRKA TETFLTIADN  300
KVEMEVERGI YTNADLNNDK MKNREVQNGG VSQPDVATHI DQRTAGDLES PCNNTQEDYR  360
PASPGTQALL CDEQGTAFGS DYRTSFPSAF YDQDTPELSA LQEKTVLTGF RDYLRLLITR  420
GKINANNSAG MTEANTSSEP AMELDARRNH GATTGPGVSS LPSEAVERPK APGGPENPRT  480
SDPSA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G29000.1	8e-88	CPP family protein

Link Out ? help Back to Top
Ensembl	TRIDC7BG039840.3