PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC7BG039840.6

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

CPP

Protein Properties

Length: 396aa MW: 43433 Da PI: 8.0593

Description

CPP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC7BG039840.6	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCR	44.3	3.6e-14	19	58	2	42
TCR 2 ekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNkeek 42 +kk+CnCk+s+Clk+YCeCfaag +C+ C+C++C Nk e+ TRIDC7BG039840.6 19 RKKQCNCKNSHCLKLYCECFAAGLYCDG-CNCKQCGNKVEN 58 689***********************.******9875 PP
2	TCR	50.7	3.4e-16	101	140	1	40
TCR 1 kekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNke 40 k++kgC+Ckks ClkkYCeCf+a+ Cs++CkC dCkN e TRIDC7BG039840.6 101 KHNKGCHCKKSGCLKKYCECFQANILCSKNCKCMDCKNFE 140 589***********************************65 PP

Sequence ? help Back to Top
Protein Sequence Length: 396 aa Download sequence
SFTMIKPVVE IKSVTPPKRK KQCNCKNSHC LKLYCECFAA GLYCDGCNCK QCGNKVENEH 60 ARQEAINSTK LRNPKAFQPK IENVPSTLSV RKDAGAPSVP KHNKGCHCKK SGCLKKYCEC 120 FQANILCSKN CKCMDCKNFE GSEELQAIIQ GDNASDKNNV QQAANVTLNG AIGSSGYKYS 180 PVRRKRHPED PLGPEANHLD ASQVASSSGL EGCIGYQSRS KMVYRSPLAN TIHPTDVNDL 240 ANHLVIVCRK ATETFLTIAD NKVEMEVERG IYTNADLNND KMKNREVQNG GVSQPDVATH 300 IDQRTAGDLE SPCNNTQEDY RPASPGTQAL LCDEQGTAFG SDYRTSFPSA FYDQDTPELS 360 ALQEKTVLTG FRDYLRLLIT RGKINGGELL SSAGAK

Sequence ? help Back to Top

Protein Sequence Length: 396 aa Download sequence

SFTMIKPVVE IKSVTPPKRK KQCNCKNSHC LKLYCECFAA GLYCDGCNCK QCGNKVENEH  60
ARQEAINSTK LRNPKAFQPK IENVPSTLSV RKDAGAPSVP KHNKGCHCKK SGCLKKYCEC  120
FQANILCSKN CKCMDCKNFE GSEELQAIIQ GDNASDKNNV QQAANVTLNG AIGSSGYKYS  180
PVRRKRHPED PLGPEANHLD ASQVASSSGL EGCIGYQSRS KMVYRSPLAN TIHPTDVNDL  240
ANHLVIVCRK ATETFLTIAD NKVEMEVERG IYTNADLNND KMKNREVQNG GVSQPDVATH  300
IDQRTAGDLE SPCNNTQEDY RPASPGTQAL LCDEQGTAFG SDYRTSFPSA FYDQDTPELS  360
ALQEKTVLTG FRDYLRLLIT RGKINGGELL SSAGAK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G29000.1	4e-88	CPP family protein

Link Out ? help Back to Top
Ensembl	TRIDC7BG039840.6