PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC7BG039930.4

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

FAR1

Protein Properties

Length: 545aa MW: 59764.7 Da PI: 7.9065

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC7BG039930.4	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	49.7	1.2e-15	224	303	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 +fYn Y+ evGF +r ks+++ +g+ +++ vC + gk+e+e+++ + r +C a+l++++++dg w+v++ + HnHe+ TRIDC7BG039930.4 224 EFYNLYSWEVGFGIRYGKSRQN-VSGTKCMQEIVCGCAGKPERENSS---------SMRSNCAAMLRLHRTDDGGWYVSENRASHNHEML 303 6***************9998.77778999*****9987666.........99***************************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 545 aa Download sequence
RLSLLMPNLG QTAEAGLDSG TISAATVPQA CEPPFVVGEC GDATPDSAVV TPDPAVEAPL 60 PYIQLLDQVV GLVDVQSSGA SCKSFSAGGG DLASANPGCG TPAGVSHTSA ESSRRSASSG 120 SCTTFSSGGV CLPSARDAND TPAVVSSSAV QSLAQNGAAS GNSTIRVGWK RRPRGPRAPD 180 ERSVVVDRVP PLEAAIRGFA DRGTEVVVNP VLGTIFDSLA EAYEFYNLYS WEVGFGIRYG 240 KSRQNVSGTK CMQEIVCGCA GKPERENSSS MRSNCAAMLR LHRTDDGGWY VSENRASHNH 300 EMLRTCAEKL HWPSHRHIDT YTRDLVKQLR QNNVNLGKVY SIIGSLFGRM ENVPFTKRCL 360 RTFCGKLSKE QADDDVRKTM DAFSELGSND PEFSYVVEVD KESKIKTLLW TNGRSKMQYH 420 NFGDVLTFDT TYKTNLYDMP FGIFVGVNNH FQSIIMGGVM MREETIESFK WVFTEFIRLM 480 GGKHPKTILT DQARAMEVAI EQTMPDTTHR WCKWHVLRKA KEHLGPHYTK AVILGLRCTR 540 WSMKC

Sequence ? help Back to Top

Protein Sequence Length: 545 aa Download sequence

RLSLLMPNLG QTAEAGLDSG TISAATVPQA CEPPFVVGEC GDATPDSAVV TPDPAVEAPL  60
PYIQLLDQVV GLVDVQSSGA SCKSFSAGGG DLASANPGCG TPAGVSHTSA ESSRRSASSG  120
SCTTFSSGGV CLPSARDAND TPAVVSSSAV QSLAQNGAAS GNSTIRVGWK RRPRGPRAPD  180
ERSVVVDRVP PLEAAIRGFA DRGTEVVVNP VLGTIFDSLA EAYEFYNLYS WEVGFGIRYG  240
KSRQNVSGTK CMQEIVCGCA GKPERENSSS MRSNCAAMLR LHRTDDGGWY VSENRASHNH  300
EMLRTCAEKL HWPSHRHIDT YTRDLVKQLR QNNVNLGKVY SIIGSLFGRM ENVPFTKRCL  360
RTFCGKLSKE QADDDVRKTM DAFSELGSND PEFSYVVEVD KESKIKTLLW TNGRSKMQYH  420
NFGDVLTFDT TYKTNLYDMP FGIFVGVNNH FQSIIMGGVM MREETIESFK WVFTEFIRLM  480
GGKHPKTILT DQARAMEVAI EQTMPDTTHR WCKWHVLRKA KEHLGPHYTK AVILGLRCTR  540
WSMKC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	3e-43	FAR1 family protein

Link Out ? help Back to Top
Ensembl	TRIDC7BG039930.4