PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC7BG039930.8

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

FAR1

Protein Properties

Length: 513aa MW: 56567.1 Da PI: 8.1737

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC7BG039930.8	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	49.9	1.1e-15	192	271	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 +fYn Y+ evGF +r ks+++ +g+ +++ vC + gk+e+e+++ + r +C a+l++++++dg w+v++ + HnHe+ TRIDC7BG039930.8 192 EFYNLYSWEVGFGIRYGKSRQN-VSGTKCMQEIVCGCAGKPERENSS---------SMRSNCAAMLRLHRTDDGGWYVSENRASHNHEML 271 6***************9998.77778999*****9987666.........99***************************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 513 aa Download sequence
PPFVVGECGD ATPDSAVVTP DPAVEAPLPY IQLLDQVVGL VDVQSSGASC KSFSAGGGDL 60 ASANPGCGTP AGVSHTSAES SRRSASSGSC TTFSSGGVCL PSARDANDTP AVVSSSAVQS 120 LAQNGAASGN STIRVGWKRR PRGPRAPDER SVVVDRVPPL EAAIRGFADR GTEVVVNPVL 180 GTIFDSLAEA YEFYNLYSWE VGFGIRYGKS RQNVSGTKCM QEIVCGCAGK PERENSSSMR 240 SNCAAMLRLH RTDDGGWYVS ENRASHNHEM LRTCAEKLHW PSHRHIDTYT RDLVKQLRQN 300 NVNLGKVYSI IGSLFGRMEN VPFTKRCLRT FCGKLSKEQA DDDVRKTMDA FSELGSNDPE 360 FSYVVEVDKE SKIKTLLWTN GRSKMQYHNF GDVLTFDTTY KTNLYDMPFG IFVGVNNHFQ 420 SIIMGGVMMR EETIESFKWV FTEFIRLMGG KHPKTILTDQ ARAMEVAIEQ TMPDTTHRWC 480 KWHVLRKAKE HLGPHYTKAV ILGLRCTRWS MKC

Sequence ? help Back to Top

Protein Sequence Length: 513 aa Download sequence

PPFVVGECGD ATPDSAVVTP DPAVEAPLPY IQLLDQVVGL VDVQSSGASC KSFSAGGGDL  60
ASANPGCGTP AGVSHTSAES SRRSASSGSC TTFSSGGVCL PSARDANDTP AVVSSSAVQS  120
LAQNGAASGN STIRVGWKRR PRGPRAPDER SVVVDRVPPL EAAIRGFADR GTEVVVNPVL  180
GTIFDSLAEA YEFYNLYSWE VGFGIRYGKS RQNVSGTKCM QEIVCGCAGK PERENSSSMR  240
SNCAAMLRLH RTDDGGWYVS ENRASHNHEM LRTCAEKLHW PSHRHIDTYT RDLVKQLRQN  300
NVNLGKVYSI IGSLFGRMEN VPFTKRCLRT FCGKLSKEQA DDDVRKTMDA FSELGSNDPE  360
FSYVVEVDKE SKIKTLLWTN GRSKMQYHNF GDVLTFDTTY KTNLYDMPFG IFVGVNNHFQ  420
SIIMGGVMMR EETIESFKWV FTEFIRLMGG KHPKTILTDQ ARAMEVAIEQ TMPDTTHRWC  480
KWHVLRKAKE HLGPHYTKAV ILGLRCTRWS MKC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	1e-43	FAR1 family protein

Link Out ? help Back to Top
Ensembl	TRIDC7BG039930.8