PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC7BG040270.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

MYB

Protein Properties

Length: 237aa MW: 26439.4 Da PI: 8.7463

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC7BG040270.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	53.4	6e-17	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg W++eEde+l + ++++G g+W+++++ g+ R++k+c++rw +yl TRIDC7BG040270.1 14 RGLWSPEEDEKLMNHIAMYGHGCWSSVPKLAGLERCGKSCRLRWINYL 61 788*******************************************97 PP
2	Myb_DNA-binding	26	2.1e-08	88	111	23	47
-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 23 tWktIartmgkgRtlkqcksrwqky 47 W+ Ia+ ++ gRt++++k++w++y TRIDC7BG040270.1 88 KWSQIAAQLP-GRTDNEVKNFWNSY 111 4*******.**********98 PP

Sequence ? help Back to Top
Protein Sequence Length: 237 aa Download sequence
MAKQSCCHKK RLRRGLWSPE EDEKLMNHIA MYGHGCWSSV PKLAGLERCG KSCRLRWINY 60 LRPDLKRRRS VRLCIAFVPM YVYCTYCKWS QIAAQLPGRT DNEVKNFWNS YIKKKLRERG 120 IDPATHKPLA EATTSPTACR PVFSDAELIP RTTALAQDQQ VDKMLDSLKM QLDSPVGGVA 180 GNGVPESYQV PSLQEGCDFH MGAHCGTFPS ASSSSTLTAT DVGATTLPWL ELGPTDT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G09540.1	3e-62	MYB family protein

Link Out ? help Back to Top
Ensembl	TRIDC7BG040270.1