PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC7BG041620.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family HB-other
Protein Properties Length: 286aa    MW: 32052.9 Da    PI: 4.1654
Description HB-other family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC7BG041620.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox29.21.6e-09218265653
                       S--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHH CS
          Homeobox   6 tftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRa 53 
                       +++k qle+Le+++ k++ p+ +++  + + ++L+ + +  WF  rR 
  TRIDC7BG041620.2 218 RLKKAQLETLEKVYLKSKRPTNTMISSIVQVTSLPRKTIIKWFEDRRE 265
                       6789******************************************95 PP
Sequence ? help Back to Top
Protein Sequence    Length: 286 aa     Download sequence    
CRKLMRPCLC KNKIKDEVVV AEDDIDGGDE DDDDEGGLEA LFKQLEEDLK NDDLSVDDDD  60
DEISEEDMAR FEQVLAEAMG DTDVADESAV DSAPGSEVVG NDEVADPVEK PELKSWQLRR  120
LARALNIGRR KTSIKNLAGE LGLDRGLVIE LLRNPPPELL LMSDSLPDEA PSKPETKEIE  180
TSPVADEVEV DEIEATETKP QMDLPVHVMS TEWSAQKRLK KAQLETLEKV YLKSKRPTNT  240
MISSIVQVTS LPRKTIIKWF EDRREQDGVP DRRAAYMRSL SETMAS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G11270.12e-51HB-other family protein