PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC7BG043120.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family GATA
Protein Properties Length: 361aa    MW: 38730 Da    PI: 8.5715
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC7BG043120.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA54.71.4e-17177210134
              GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkg 34 
                       Cs C+ttkTplWR+gp g+k+LCnaCG+++rk +
  TRIDC7BG043120.1 177 CSDCNTTKTPLWRSGPCGPKSLCNACGIRQRKAR 210
                       *******************************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 361 aa     Download sequence    
MSTIYMSQLS TAFPLMEEDH HQDHHQGHFQ AFTLPKDPPI LFPFVISNSG PSDNSSTLSY  60
GSDQHLMQHH AMLDQPQHMI GGSSSVFSTP FPTVESIRDD MIERSYSYDP YDMEKLQATS  120
GSLKIGKWTA PAPAAKMRIT RKTSDPGVKK PRKRAQAYED HGHMGGMNQA LGVIRTCSDC  180
NTTKTPLWRS GPCGPKSLCN ACGIRQRKAR RAMMATGAAP ATDVGATKAA APGDDAVTVH  240
PPKVKKEKRA ADVDRSLPFK KRCKVVQDHT ATNAAASTTV EAAAEPPVVV TTTTTTTAAA  300
AAPARDLVDT IGANWSKSPT VAAAACFRPS PATFAVPVPV QDEITDAAML LMTLSCELVR  360
S
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1207248RKARRAMMATGAAPATDVGATKAAAPGDDAVTVHPPKVKKEK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G56860.13e-19GATA family protein