PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC7BG043430.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family HSF
Protein Properties Length: 105aa    MW: 11585.1 Da    PI: 4.7703
Description HSF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC7BG043430.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HSF_DNA-bind74.61.8e-2343101260
                       HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHT CS
      HSF_DNA-bind   2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmY 60 
                       Fl k+++++ed++++ ++sw +  nsfvv+d++ fa ++Lp++Fkh nf+SF+RQLn+Y
  TRIDC7BG043430.2  43 FLAKTFDMVEDPATDAVVSWGAARNSFVVWDPHAFAARLLPRHFKHANFSSFLRQLNTY 101
                       9********************999**********************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 105 aa     Download sequence    
VTMDIKQEEH EMVVLDDDND GDAGCCRAPT PLDLAAAAAV APFLAKTFDM VEDPATDAVV  60
SWGAARNSFV VWDPHAFAAR LLPRHFKHAN FSSFLRQLNT YVRIP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G26150.12e-27HSF family protein