PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC7BG043820.10

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

NAC

Protein Properties

Length: 466aa MW: 51233.5 Da PI: 7.8344

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC7BG043820.10	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	103.7	2.4e-32	54	224	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkk........lelee.......vikev.diykvePwdLpkkvkaeekewyfFskrdkkyatgkrknr 76 lp+G++F+Ptd+el+ e+L++kv++ + +i+ +i++++P++Lp v+++ + +fF++ +k+y+tg+rk+r TRIDC7BG043820.10 54 LPAGVKFDPTDQELI-EHLEAKVQSGGtaavaapsH---PlidefipTIEGEdGICYTHPEKLP-GVSKDGLSRHFFHRPSKAYTTGTRKRR 140 799**********.99**999665555551...055555444776646******.556667799************** PP NAM 77 a...............................tksgyWkatgkdkevlskkgelvglkktLvfy..kgrapkgektdWvmheyrl 128 + ++ +W++tgk+++v + +g++ g+kk+Lv+y g+++k+ekt+Wvmh+y+l TRIDC7BG043820.10 141 KiqppaivdastlssagsaaagaahqqqqqqqRSETRWHKTGKTRPVAV-GGRQRGCKKILVLYtnFGKHRKPEKTNWVMHQYHL 224 88*********************9998755789********.99********5547999999*******98 PP

Sequence ? help Back to Top
Protein Sequence Length: 466 aa Download sequence
MDDGATATAG GGTSSGGHHL IGSRIEEHRK YMSDSSCCPR CGHKIDQKLD WVGLPAGVKF 60 DPTDQELIEH LEAKVQSGGT AAVAAPSHPL IDEFIPTIEG EDGICYTHPE KLPGVSKDGL 120 SRHFFHRPSK AYTTGTRKRR KIQPPAIVDA STLSSAGSAA AGAAHQQQQQ QQRSETRWHK 180 TGKTRPVAVG GRQRGCKKIL VLYTNFGKHR KPEKTNWVMH QYHLGESEEE REGELVVSKI 240 FYQTQPRQCG VGDGASASVP SSTGRSAVQK RRVDSAGTSP AVRMTPSDMV NAAFQGTTHI 300 QDFSFAQFRN TVEEVGMGGS DHQVVQLQQH QQQQRHHVVD EHDHRRHHHH YPGLQQEHHR 360 SSTAAFQVST PTDPIATLIP VHQGSVVLTA PTAEPYGHGA PSYHNQEDER PHQTRKFDGR 420 STSGLEEVIM GCTSRRSKGG ETSGSKEGTE WQYPSFWPSD NQDHHG

Sequence ? help Back to Top

Protein Sequence Length: 466 aa Download sequence

MDDGATATAG GGTSSGGHHL IGSRIEEHRK YMSDSSCCPR CGHKIDQKLD WVGLPAGVKF  60
DPTDQELIEH LEAKVQSGGT AAVAAPSHPL IDEFIPTIEG EDGICYTHPE KLPGVSKDGL  120
SRHFFHRPSK AYTTGTRKRR KIQPPAIVDA STLSSAGSAA AGAAHQQQQQ QQRSETRWHK  180
TGKTRPVAVG GRQRGCKKIL VLYTNFGKHR KPEKTNWVMH QYHLGESEEE REGELVVSKI  240
FYQTQPRQCG VGDGASASVP SSTGRSAVQK RRVDSAGTSP AVRMTPSDMV NAAFQGTTHI  300
QDFSFAQFRN TVEEVGMGGS DHQVVQLQQH QQQQRHHVVD EHDHRRHHHH YPGLQQEHHR  360
SSTAAFQVST PTDPIATLIP VHQGSVVLTA PTAEPYGHGA PSYHNQEDER PHQTRKFDGR  420
STSGLEEVIM GCTSRRSKGG ETSGSKEGTE WQYPSFWPSD NQDHHG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G29230.1	1e-95	NAC family protein

Link Out ? help Back to Top
Ensembl	TRIDC7BG043820.10