PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC7BG043820.11

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

NAC

Protein Properties

Length: 200aa MW: 21916.5 Da PI: 11.2046

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC7BG043820.11	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	56	1.3e-17	59	156	1	87
NAM 1 lppGfrFhPtdeelvveyLkkkvegkk........lelee.......vikev.diykvePwdLpkkvkaeekewyfFskrdkkyatgkrknr 76 lp+G++F+Ptd+el+ e+L++kv++ + +i+ +i++++P++Lp v+++ + +fF++ +k+y+tg+rk+r TRIDC7BG043820.11 59 LPAGVKFDPTDQELI-EHLEAKVQSGGtaavaapsH---PlidefipTIEGEdGICYTHPEKLP-GVSKDGLSRHFFHRPSKAYTTGTRKRR 145 799**********.99**999665555551...055555444776646******.556667799**************** PP NAM 77 atksgyWkatg 87 +++s+ +++g TRIDC7BG043820.11 146 KIHSSSNSSSG 156 97765544444 PP

Sequence ? help Back to Top
Protein Sequence Length: 200 aa Download sequence
TMVQRQRQEE EQAAAATTSS DRGLRSTAST CRTRAAVPGA ATRSTRSWYI RMIPDWVGLP 60 AGVKFDPTDQ ELIEHLEAKV QSGGTAAVAA PSHPLIDEFI PTIEGEDGIC YTHPEKLPGV 120 SKDGLSRHFF HRPSKAYTTG TRKRRKIHSS SNSSSGARRG GTRLARRGRW LWAADRGGAR 180 RFWCSTPTSA STESPRRPTG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G56620.1	2e-47	NAC family protein

Link Out ? help Back to Top
Ensembl	TRIDC7BG043820.11