PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC7BG043820.17
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family NAC
Protein Properties Length: 246aa    MW: 27233.7 Da    PI: 9.4556
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC7BG043820.17genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM110.91.5e-34161671128
                NAM   1 lppGfrFhPtdeelvveyLkkkvegkk........lelee.......vikev.diykvePwdLpkkvkaeekewyfFskrdkkyatgkrknr 76 
                        lp+G++F+Ptd+el+ e+L++kv++          +           +i+   +i++++P++Lp  v+++  + +fF++ +k+y+tg+rk+r
  TRIDC7BG043820.17  16 LPAGVKFDPTDQELI-EHLEAKVQSGGtaavaapsH---PlidefipTIEGEdGICYTHPEKLP-GVSKDGLSRHFFHRPSKAYTTGTRKRR 102
                        799************.99******999665555551...055555444776646**********.556667799****************** PP

                NAM  77 a............tksgyWkatgkdkevlskkgelvglkktLvfy..kgrapkgektdWvmheyrl 128
                        +             ++ +W++tgk+++v + +g++ g+kk+Lv+y   g+++k+ekt+Wvmh+y+l
  TRIDC7BG043820.17 103 KiqppaiqqqqqqRSETRWHKTGKTRPVAV-GGRQRGCKKILVLYtnFGKHRKPEKTNWVMHQYHL 167
                        879999998887655889************.99************5547999999*********98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 246 aa     Download sequence    
ISVDSSCICM QDWVGLPAGV KFDPTDQELI EHLEAKVQSG GTAAVAAPSH PLIDEFIPTI  60
EGEDGICYTH PEKLPGVSKD GLSRHFFHRP SKAYTTGTRK RRKIQPPAIQ QQQQQRSETR  120
WHKTGKTRPV AVGGRQRGCK KILVLYTNFG KHRKPEKTNW VMHQYHLGES EEEREGELVV  180
SKIFYQTQPR QCGVGDGASA SVPSSTGRSA VQKRRVDSAG TSPAVRMTPS DMVNAAFQGT  240
THIQDF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G29230.15e-95NAC family protein