PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC7BG044220.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family HSF
Protein Properties Length: 266aa    MW: 28425.8 Da    PI: 6.5304
Description HSF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC7BG044220.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HSF_DNA-bind104.59.1e-33161062101
                       HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXX CS
      HSF_DNA-bind   2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkell 94 
                       F+ k+y+++ed+ ++ +i w + +nsfvv d+  f++++Lp +Fkh+nf+SFvRQLn+YgF+kv+ ++         weF+h sF +g+++ll
  TRIDC7BG044220.1  16 FVWKTYRMVEDPGTDGVIGWGKGNNSFVVADPFVFSQTMLPAHFKHNNFSSFVRQLNTYGFRKVDPDR---------WEFAHGSFLRGQTHLL 99 
                       9****************************************************************999.........**************** PP

                       XXXXXXX CS
      HSF_DNA-bind  95 ekikrkk 101
                       ++i r+ 
  TRIDC7BG044220.1 100 RNIVRRG 106
                       ****985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 266 aa     Download sequence    
ERPMAAASVG GGAAPFVWKT YRMVEDPGTD GVIGWGKGNN SFVVADPFVF SQTMLPAHFK  60
HNNFSSFVRQ LNTYGFRKVD PDRWEFAHGS FLRGQTHLLR NIVRRGTPAP GGGGKRKDAG  120
AAGLTDDDMT MVATEVVRLK KEQSTIDDRV AAMWRRVQET ERKPKQMLAF LLTIVGDRDT  180
LQRLVGNSGN AAGGDQEPVE GGEKRARLLL DGDFGNVSAF GPDAVDFAGF YTDDAFANAP  240
VPVEAAAGSG GGGAGCTFAF GVDSGY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G24520.11e-58HSF family protein