PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC7BG046180.4
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family MIKC_MADS
Protein Properties Length: 225aa    MW: 25582.9 Da    PI: 8.6112
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC7BG046180.4genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF89.91.3e-28555151
                      S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
            SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
                      krien +nrqvt+skRr gi+KKA EL vLCda+va+i+fsstgk +e++s
  TRIDC7BG046180.4  5 KRIENATNRQVTYSKRRSGIMKKARELTVLCDAQVAIIMFSSTGKYHEFCS 55
                      79***********************************************96 PP
2K-box88.41.4e-2967164198
             K-box   1 yqkssgksleeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenka 93 
                       yq++ g+sl+ +++e++q+ l+ Lk+ ++nL++e+R+++GedL+ L+++eL+ Leq+++ +lk++R++K++++++q+e+ +kk k  qe+ k+
  TRIDC7BG046180.4  67 YQQAIGTSLWIEQYENMQRTLSHLKDINRNLRTEIRQRMGEDLDALEFEELRDLEQNVDAALKEVRQRKYHVITTQTETYKKKVKHSQEAYKN 159
                       67888999************************************************************************************* PP

             K-box  94 Lrkkl 98 
                       L+++l
  TRIDC7BG046180.4 160 LQQEL 164
                       **987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 225 aa     Download sequence    
KIEIKRIENA TNRQVTYSKR RSGIMKKARE LTVLCDAQVA IIMFSSTGKY HEFCSTGTDI  60
KGIFDRYQQA IGTSLWIEQY ENMQRTLSHL KDINRNLRTE IRQRMGEDLD ALEFEELRDL  120
EQNVDAALKE VRQRKYHVIT TQTETYKKKV KHSQEAYKNL QQELGMREDP AYGFVDNPAA  180
GGWDGVAAVA MGGGSAADMY AFRVVPSQPN LHGMAYGGSH DLRLG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G54340.18e-63MIKC_MADS family protein