PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC7BG048500.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

bHLH

Protein Properties

Length: 321aa MW: 33873.8 Da PI: 8.506

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC7BG048500.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	28.8	2.1e-09	150	197	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h+ +Er RR++iN ++e L+el+P + sk a +Le+ +++++sLq TRIDC7BG048500.1 150 SHSLAERARREKINARMELLKELVPGC----SKVSGTALVLEEIINHVQSLQ 197 8*************************9....344668999999999999998 PP

Sequence ? help Back to Top
Protein Sequence Length: 321 aa Download sequence
XXXXXHPSPP PELPAAGGEI QAMAPASAAG SSSTGGSFTA LLGLPTSQAI ELLLPGAAPA 60 PAPAPAFPSD PHLVDRAARF SAFASPSPSP TPPPPASSAK RKADPASKVR TSVAKKGKTT 120 AGGGEEKDSG EDEKPAYVHV RARRGQATDS HSLAERARRE KINARMELLK ELVPGCSKVS 180 GTALVLEEII NHVQSLQRQV EYLSMRLAAV NPRVDFGGLD NLLTTECGRI TGLNCKSGMD 240 LEQVSWPDMG VHGARNLAQL QQQFWHGDLA HPHQPASQWE KRGDVQPPGF SNTSSSLFGY 300 DLASSASHGP RPLSFSLSRV F

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G57800.2	1e-50	bHLH family protein

Link Out ? help Back to Top
Ensembl	TRIDC7BG048500.1