PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC7BG049730.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

G2-like

Protein Properties

Length: 579aa MW: 64832.3 Da PI: 4.4473

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC7BG049730.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	53.5	5.2e-17	156	206	5	55
G2-like 5 rWtpeLHerFveaveqLGGsekAtPktilelmkvkg..LtlehvkSHLQkYRl 55 W++eLHe+F++ave LG + At ++i + m+ k+ Lt++hv+SHLQk+Rl TRIDC7BG049730.1 156 LWSSELHEKFLQAVEVLG-A-SATARNIHQYMNAKDldLTIQHVASHLQKHRL 206 5**************4.4.5999*****96337***********8 PP
2	Myb_DNA-binding	31.3	4.8e-10	157	205	4	48
S-HHHHHHHHHHHHHTTTT.-HHHHHHHHT...TTS-HHHHHHHHHHHT CS Myb_DNA-binding 4 WTteEdellvdavkqlGgg.tWktIartmg...kgRtlkqcksrwqkyl 48 W+ e++e++++av+ lG t + I ++m+ + +t ++ s++qk++ TRIDC7BG049730.1 157 WSSELHEKFLQAVEVLGASaTARNIHQYMNakdLDLTIQHVASHLQKHR 205 ***************99**************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 579 aa Download sequence
MENLSVLVLD RDPVSLWTIS NTLARFNFKV LPFQTVEEAL DSLKRGVPKN EELDLVVAEV 60 HPGNAEMDTL VLFHHILNEL EVPLITMCAY DEAVSTRMTL GTCFNVVKPL DTETVNFLRM 120 RALQHRSIKN HRSETEDEKQ DALNANVYSE NLGWFLWSSE LHEKFLQAVE VLGASATARN 180 IHQYMNAKDL DLTIQHVASH LQKHRLRAQR QRLSHDEEGY QHYASMKELS EMMSSAYKAP 240 SAKPNNHLAT TQTQFTHGVA SSIWDKYPGM VWPHMEGSSV ASAMWYNYPG KRWGQVGESS 300 AGARVSQTNA CPPPVLIHGT KSIWDWYQES LQYYNESLPY KREVLPVQSK ALDGYGRKIF 360 INLEREEISH TEAAGKIVIN LESDDMQKDT KDDVHAAVTP QEDTMNEVHA AVTLQKDTMD 420 EAHAAVTPHE VNEVPAAAMG AGYLVDLAGN ALLDGIDSYH PAAENAQSEP FNDWDWEEVE 480 KFLTNQIEGQ GQEQQGLELV DLLQLDGISL EELLQVDEAW NQALQQANPA NVVEDEPMAE 540 EPAAGHAPVS DPANQSVVAD NMFGVWSPQF AGDDYGMPF

Sequence ? help Back to Top

Protein Sequence Length: 579 aa Download sequence

MENLSVLVLD RDPVSLWTIS NTLARFNFKV LPFQTVEEAL DSLKRGVPKN EELDLVVAEV  60
HPGNAEMDTL VLFHHILNEL EVPLITMCAY DEAVSTRMTL GTCFNVVKPL DTETVNFLRM  120
RALQHRSIKN HRSETEDEKQ DALNANVYSE NLGWFLWSSE LHEKFLQAVE VLGASATARN  180
IHQYMNAKDL DLTIQHVASH LQKHRLRAQR QRLSHDEEGY QHYASMKELS EMMSSAYKAP  240
SAKPNNHLAT TQTQFTHGVA SSIWDKYPGM VWPHMEGSSV ASAMWYNYPG KRWGQVGESS  300
AGARVSQTNA CPPPVLIHGT KSIWDWYQES LQYYNESLPY KREVLPVQSK ALDGYGRKIF  360
INLEREEISH TEAAGKIVIN LESDDMQKDT KDDVHAAVTP QEDTMNEVHA AVTLQKDTMD  420
EAHAAVTPHE VNEVPAAAMG AGYLVDLAGN ALLDGIDSYH PAAENAQSEP FNDWDWEEVE  480
KFLTNQIEGQ GQEQQGLELV DLLQLDGISL EELLQVDEAW NQALQQANPA NVVEDEPMAE  540
EPAAGHAPVS DPANQSVVAD NMFGVWSPQF AGDDYGMPF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G16110.1	7e-16	ARR-B family protein

Link Out ? help Back to Top
Ensembl	TRIDC7BG049730.1