PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC7BG050340.3

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

MYB

Protein Properties

Length: 142aa MW: 15983.2 Da PI: 9.9171

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC7BG050340.3	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	54.3	3e-17	14	62	1	48
TSSS-HHHHHHHHHHHHHTTTT.-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg.tWktIartmgkgRtlkqcksrwqkyl 48 +g+W++eEd +l+d+++ +G+g +W + + + g++R++k+c++rw++yl TRIDC7BG050340.3 14 KGPWSPEEDRKLKDYIHTHGTGgNWIALPTKAGLKRCGKSCRLRWLNYL 62 79*********************************************97 PP
2	Myb_DNA-binding	39.1	1.7e-12	69	111	2	46
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 g ++ eEd + +++ G++ W+ Ia+ ++ gRt++++k++w++ TRIDC7BG050340.3 69 GDFSDEEDRVICALFAAIGSR-WSIIAAQLP-GRTDNDVKNYWNT 111 679****************.*****.*********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 142 aa Download sequence
MGRAPCCDKG SVKKGPWSPE EDRKLKDYIH THGTGGNWIA LPTKAGLKRC GKSCRLRWLN 60 YLRPNIKHGD FSDEEDRVIC ALFAAIGSRW SIIAAQLPGR TDNDVKNYWN TKLKKKQLHL 120 LIAASAHGQQ YGSRPPQQEE DA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G57620.1	2e-74	MYB family protein

Link Out ? help Back to Top
Ensembl	TRIDC7BG050340.3