PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC7BG050570.3

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

G2-like

Protein Properties

Length: 384aa MW: 41869.7 Da PI: 6.1505

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC7BG050570.3	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	100.9	8.2e-32	274	328	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 k rlrWt eLHerFveav++L G++kAtPk +l+lmkv+gLt++hvkSHLQkYR TRIDC7BG050570.3 274 KSRLRWTLELHERFVEAVNKLEGPDKATPKGVLKLMKVEGLTIYHVKSHLQKYRH 328 68****************************************************6 PP
2	Myb_DNA-binding	55.2	1.6e-17	276	327	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT e++e++v+av++l g+ t+k + + m +g+t +++ks++qky+ TRIDC7BG050570.3 276 RLRWTLELHERFVEAVNKLEGPdkaTPKGVLKLMKvEGLTIYHVKSHLQKYR 327 89*************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 384 aa Download sequence
MSSHGVVAVK PIAAPDKTAH SYACGSTQSS VHKLLDAKLD HLGLLDDNLS STSQSSDIKT 60 ELIRTSSLGR SSLPFNLQRR SPEPDPESPL SHVSHPNFSE PMASNSSTFC TSLFSSSSTN 120 SAPCRRMGAL PFLPHPPKYE QQVLPGQSST SSLQLSGDTG NVHDEAEQTD DIKDFLNLSV 180 GDASDGSFHG ENQAFAFAEA EQMEFQFLSE QLGIAITDNE ESPQLDDIYD TPPPQMSPLP 240 VSSCYNQSLQ NPGSPAKLPL SSSRSSSGSA AANKSRLRWT LELHERFVEA VNKLEGPDKA 300 TPKGVLKLMK VEGLTIYHVK SHLQKYRHAK YIPEIKEEKK ASSDVKKVQP GSSGSDPFKN 360 KNLAEALRMQ MEVQKQLHEQ LEVV

Sequence ? help Back to Top

Protein Sequence Length: 384 aa Download sequence

MSSHGVVAVK PIAAPDKTAH SYACGSTQSS VHKLLDAKLD HLGLLDDNLS STSQSSDIKT  60
ELIRTSSLGR SSLPFNLQRR SPEPDPESPL SHVSHPNFSE PMASNSSTFC TSLFSSSSTN  120
SAPCRRMGAL PFLPHPPKYE QQVLPGQSST SSLQLSGDTG NVHDEAEQTD DIKDFLNLSV  180
GDASDGSFHG ENQAFAFAEA EQMEFQFLSE QLGIAITDNE ESPQLDDIYD TPPPQMSPLP  240
VSSCYNQSLQ NPGSPAKLPL SSSRSSSGSA AANKSRLRWT LELHERFVEA VNKLEGPDKA  300
TPKGVLKLMK VEGLTIYHVK SHLQKYRHAK YIPEIKEEKK ASSDVKKVQP GSSGSDPFKN  360
KNLAEALRMQ MEVQKQLHEQ LEVV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G13040.1	7e-55	G2-like family protein

Link Out ? help Back to Top
Ensembl	TRIDC7BG050570.3