PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC7BG051640.3
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family GATA
Protein Properties Length: 247aa    MW: 26682.5 Da    PI: 4.729
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC7BG051640.3genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA50.82.2e-16207241133
              GATA   1 CsnCgttk..TplWRrgpdgnktLCnaCGlyyrkk 33 
                       C++Cgt    Tp++Rrgp+g++tLCnaCGl+++ k
  TRIDC7BG051640.3 207 CHHCGTNAhnTPMMRRGPEGPRTLCNACGLMWANK 241
                       ******9999**********************875 PP
Sequence ? help Back to Top
Protein Sequence    Length: 247 aa     Download sequence    
EEEEEEEEEE EEEEMEEDDD EGEGDGQHEH GQHGGNGESV PMDAEAAAQA AAAAAACAPL  60
DPHGAMVSAI VPPATGNQLT LSFQGEVYVF DSVSPDKVQA VLLLLGGREL NPGIGAGASS  120
TPYSKRLNFP HRVASLMRFR EKRKERNFDK KIRYTVRKEV ALRMQRNRGQ FTSSKPKPDD  180
GTSELATADG SPNWGSVEGR PPSAAACHHC GTNAHNTPMM RRGPEGPRTL CNACGLMWAN  240
KVLVNTC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G51600.27e-68GATA family protein