PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC7BG052180.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

HD-ZIP

Protein Properties

Length: 224aa MW: 24773.9 Da PI: 10.172

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC7BG052180.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	60.6	2.6e-19	99	154	1	56
TT--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 1 rrkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 rrk+ ++tkeq Le F+ ++ +s+ +++eLA++l+Lt rqV vWFqNrRa+ k TRIDC7BG052180.1 99 RRKKLRLTKEQCALLEGSFRAHNILSHVQKQELARQLNLTSRQVEVWFQNRRARTK 154 79999*************************************************98 PP
2	HD-ZIP_I/II	114.5	6.5e-37	100	188	1	89
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLre 89 +kk+rl+keq +lLE sF++++ L++ +K+elar+L+l+ rqv+vWFqnrRARtk+kq+E+d+e+Lkr++++l++en+rL++e eLr+ TRIDC7BG052180.1 100 RKKLRLTKEQCALLEGSFRAHNILSHVQKQELARQLNLTSRQVEVWFQNRRARTKLKQTEVDCEFLKRWCESLTHENQRLKHELLELRR 188 69*************************************************************************************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 224 aa Download sequence
VREPGSMERQ DLGAWLGLAT GGGAAWHIHD GKRRTGPVQL DALFPQHGKE ERDQDEQKTG 60 GKGARRKIKV GGDDEGRSSS SNGPCLSDGG GSDDAGGGRR KKLRLTKEQC ALLEGSFRAH 120 NILSHVQKQE LARQLNLTSR QVEVWFQNRR ARTKLKQTEV DCEFLKRWCE SLTHENQRLK 180 HELLELRRST AASVAASTKL FAQLPRAAAM VNLCPSCEKV AVNN

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	98	105	GRRKKLRL
2	149	157	RRARTKLKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G06710.1	2e-42	HD-ZIP family protein

Link Out ? help Back to Top
Ensembl	TRIDC7BG052180.1