PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC7BG052180.2

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

HD-ZIP

Protein Properties

Length: 228aa MW: 25410.8 Da PI: 9.9242

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC7BG052180.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	60.5	2.6e-19	93	148	1	56
TT--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 1 rrkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 rrk+ ++tkeq Le F+ ++ +s+ +++eLA++l+Lt rqV vWFqNrRa+ k TRIDC7BG052180.2 93 RRKKLRLTKEQCALLEGSFRAHNILSHVQKQELARQLNLTSRQVEVWFQNRRARTK 148 79999*************************************************98 PP
2	HD-ZIP_I/II	114.4	6.8e-37	94	182	1	89
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLre 89 +kk+rl+keq +lLE sF++++ L++ +K+elar+L+l+ rqv+vWFqnrRARtk+kq+E+d+e+Lkr++++l++en+rL++e eLr+ TRIDC7BG052180.2 94 RKKLRLTKEQCALLEGSFRAHNILSHVQKQELARQLNLTSRQVEVWFQNRRARTKLKQTEVDCEFLKRWCESLTHENQRLKHELLELRR 182 69*************************************************************************************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 228 aa Download sequence
MERQDLGAWL GLATGGGAAW HIHDGKRRTG PVQLDALFPQ HGKEERDQDE QKTGGKGARR 60 KIKVGGDDEG RSSSSNGPCL SDGGGSDDAG GGRRKKLRLT KEQCALLEGS FRAHNILSHV 120 QKQELARQLN LTSRQVEVWF QNRRARTKLK QTEVDCEFLK RWCESLTHEN QRLKHELLEL 180 RRSTAASVAA STKLFAQLPR AAAMVNLCPS CEKVSSYLFV CLFLRNNC

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	92	99	GRRKKLRL
2	143	151	RRARTKLKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G06710.1	2e-41	HD-ZIP family protein

Link Out ? help Back to Top
Ensembl	TRIDC7BG052180.2