PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC7BG057850.11
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family B3
Protein Properties Length: 217aa    MW: 24183.5 Da    PI: 8.2579
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC7BG057850.11genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B3795.1e-2575176199
                        EEEE-..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE- CS
                 B3   1 ffkvltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkld 85 
                        f+k+lt sd++++g +++p++ ae+        ++++++  +l  +d++g++W++++i+r++++r++lt+GW+ Fv+a++L +gD+v+F   
  TRIDC7BG057850.11  75 FCKTLTASDTSTHGGFSVPRRAAEKVfppldftMQPPAQ--ELFAKDLHGNEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFI-- 162
                        99*****************************96555544..8************************************************.. PP

                        SSSEE..EEEEE-S CS
                 B3  86 grsefelvvkvfrk 99 
                        ++++ +l+++++r+
  TRIDC7BG057850.11 163 WNDNNQLLLGIRRA 176
                        7777778***9997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 217 aa     Download sequence    
LAASTNKEIE SQIPNYPNLP PQLICQLHNV TMHADAETDE VYAQMTLQPL NPQELKDPYL  60
PAELGTANKQ PTNYFCKTLT ASDTSTHGGF SVPRRAAEKV FPPLDFTMQP PAQELFAKDL  120
HGNEWKFRHI FRGQPKRHLL TTGWSVFVSA KRLVAGDSVL FIWNDNNQLL LGIRRATRPQ  180
TVMPSSVLSS DSMHIGLLAA AAHAASTNSR FTIFYNP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G30330.21e-133ARF family protein