PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC7BG057960.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family B3
Protein Properties Length: 196aa    MW: 20786.7 Da    PI: 10.669
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC7BG057960.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B378.38.3e-2542148199
                       EEEE-..-HHHHTT-EE--HHH.HTT..........---..--SEEEEEETTS..-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEE CS
                B3   1 ffkvltpsdvlksgrlvlpkkfaeeh..........ggkkeesktltledesg..rsWevkliyrkksgryvltkGWkeFvkangLkegDfvv 81 
                       f+kv tpsdv+k++rlv+pk+fae+h          g     +  l++ed +g  + W ++++y+ +s++yv+tkGW+ Fv++ +L +gD+v 
  TRIDC7BG057960.1  42 FDKVVTPSDVGKLNRLVVPKHFAERHllprvpggaaGAAC-PGAVLRFEDGRGggKAWAFRFSYWSSSQSYVITKGWSAFVRDRRLAAGDTVS 133
                       89**************************999988753332.44589999977788************************************** PP

                       EEE-SSSEE..EEEEE-S CS
                B3  82 Fkldgrsefelvvkvfrk 99 
                       F    r +++l++  +r+
  TRIDC7BG057960.1 134 FC---RAGARLFIDCRRR 148
                       *9...4567778887775 PP
Sequence ? help Back to Top
Protein Sequence    Length: 196 aa     Download sequence    
MALTAALGRR GAEQDQEGGG GGNGGNGNGG GEGRMIMRED MFDKVVTPSD VGKLNRLVVP  60
KHFAERHLLP RVPGGAAGAA CPGAVLRFED GRGGGKAWAF RFSYWSSSQS YVITKGWSAF  120
VRDRRLAAGD TVSFCRAGAR LFIDCRRRGA GVVSAPTTCL LVPVALPQQA TLDQDRAPRG  180
RRLRLFGVDL ELAGAE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G61970.17e-36B3 family protein