PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC7BG059310.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family MYB_related
Protein Properties Length: 284aa    MW: 31331.3 Da    PI: 6.4047
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC7BG059310.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding38.82.1e-122064147
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
   Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
                      r +WT+ E++++++a +++  + Wk+I + +g  +t  q++s+ qky
  TRIDC7BG059310.1 20 RESWTEPEHDKFLEALQLFDRD-WKKIEAFVG-SKTVIQIRSHAQKY 64
                      789*****************77.*********.*************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 284 aa     Download sequence    
AAAEDARMKV RKPYTITKSR ESWTEPEHDK FLEALQLFDR DWKKIEAFVG SKTVIQIRSH  60
AQKYFLKVQK NGTGEHLPPP RPKRKAAHPY PQKASKTAPV ASQAVLSQQP APPPPPPRDQ  120
DSVNVSMDAS MVVPSTNANA VVPSWDNALV QPTQVTSAIA TNNCSSSIES QSGTWPTSEA  180
VEQENVLPQM RAMPDFSQVY NFLGSVFDPD TTGHLQRLKA MDPIDVETVL LLMRNLSMNL  240
INPEFEAHRQ LLSSYGSGGD ENKPEGMENL GSQSSHLPSM VTSE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G52660.26e-83MYB_related family protein