PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC7BG059310.9
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family MYB_related
Protein Properties Length: 225aa    MW: 23750 Da    PI: 10.1876
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC7BG059310.9genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding39.31.5e-1272116147
                       TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
   Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                       r +WT+ E++++++a +++  + Wk+I + +g  +t  q++s+ qky
  TRIDC7BG059310.9  72 RESWTEPEHDKFLEALQLFDRD-WKKIEAFVG-SKTVIQIRSHAQKY 116
                       789*****************77.*********.*************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 225 aa     Download sequence    
MSTAPKPLEA AAAAVGGGGG DGGGGGGGKG GKEQQQQVAV AAGPPMAVPA DAAAAEDARM  60
KVRKPYTITK SRESWTEPEH DKFLEALQLF DRDWKKIEAF VGSKTVIQIR SHAQKYFLKV  120
QKNGTGEHLP PPRPKRKAAH PYPQKASKTA PVASQAVLSQ QPAPPPPPPR DQDSVNVSMD  180
ASMVVPSTNA NAVVPSWDNA LVQPTQVSHV WQLQVPLPQI TALAV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G52660.22e-44MYB_related family protein