PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC7BG060000.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

NF-YC

Protein Properties

Length: 228aa MW: 25895.3 Da PI: 4.6729

Description

NF-YC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC7BG060000.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NF-YC	153.2	4.6e-48	50	153	1	101
NF-YC 1 qlksfwekq...iekatdfknhelPlarikkilkadedvkmisaeaPvllskacelfileltlrswlhaeenkrrtlkksdiaaavtrtdifd 90 ql++fw++q +e+atd+knh lPl+ri+ki+kadedv+misaeaP+l++kace+f le+t+rsw+ ++e krr l++sd+aaav+rtdi+d TRIDC7BG060000.1 50 QLQQFWAEQrseMEQATDIKNHPLPLTRIRKIMKADEDVRMISAEAPALFAKACEMFTLEMTMRSWMVTKEDKRRILQRSDVAAAVARTDIYD 142 89****9999***************************************************************************** PP NF-YC 91 flvdivprdel 101 fl+d +e+ TRIDC7BG060000.1 143 FLLDLFASEET 153 **9988875 PP

Sequence ? help Back to Top
Protein Sequence Length: 228 aa Download sequence
MVPMGVVTPA GSQPTRPFPG NPAQLSAQEQ LMYEQSQEYQ LQLQQQRQRQ LQQFWAEQRS 60 EMEQATDIKN HPLPLTRIRK IMKADEDVRM ISAEAPALFA KACEMFTLEM TMRSWMVTKE 120 DKRRILQRSD VAAAVARTDI YDFLLDLFAS EETKQGFLLP MAGQGQQPMG AQAGAYPYYY 180 APEQQVAGAS MVYGGPSTYV WQEPQVQEQG HPSGTYVWQE PPQQQEGP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G56170.1	6e-48	NF-YC family protein

Link Out ? help Back to Top
Ensembl	TRIDC7BG060000.1