PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC7BG060320.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

FAR1

Protein Properties

Length: 224aa MW: 26463.4 Da PI: 9.026

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC7BG060320.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	81.2	1.9e-25	25	119	1	91
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk...tekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHel 89 +fYn+YA e GFsvrks+ + n+ i+ r+ vCs +g+re+++ k ++++rr+r+ tr+gC+akl++++++ +g+w v+++ eH+H+l TRIDC7BG060320.1 25 EFYNKYALEKGFSVRKSYVEWDGSNKYIILRKIVCSSQGFREDKHMKrkmEDRKRRPRSLTRVGCNAKLVITRQEeTGRWFVKDFIDEHSHPL 117 6****************************************999888889999***************99**************9 PP FAR1 90 ap 91 ap TRIDC7BG060320.1 118 AP 119 86 PP

Sequence ? help Back to Top
Protein Sequence Length: 224 aa Download sequence
ASDESMFEYV NVVSKMFDSE AEGYEFYNKY ALEKGFSVRK SYVEWDGSNK YIILRKIVCS 60 SQGFREDKHM KRKMEDRKRR PRSLTRVGCN AKLVITRQEE TGRWFVKDFI DEHSHPLAPR 120 DLSCLLRSHR RISDEQKADI ADMEKCGIRK YRIMDILCFQ YGGFDKVGCI KRDVYNFCHA 180 NKQETISAGD AKTVIMHMMA RRGRDVDFFF KYLVDEHCHL KGLF

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	76	81	DRKRRP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	2e-33	FAR1 family protein

Link Out ? help Back to Top
Ensembl	TRIDC7BG060320.1