PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC7BG061390.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family FAR1
Protein Properties Length: 244aa    MW: 27376.2 Da    PI: 9.3681
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC7BG061390.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR139.42.1e-12111190190
              FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 
                       +fYn Y+ + GF +r +ks+ +  n++  +++ vC + gk+  e+++         + r++C a +++ ++kd+ w++++ +  HnH+l+
  TRIDC7BG061390.2 111 DFYNLYSWKKGFGIRYRKSRLN-VNRTKCMQEIVCGCAGKPIVENTR---------SCRCECPALIRLLRTKDNGWYIAEHRDGHNHALS 190
                       6****************99998.555678899*******99887555.........99******************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 244 aa     Download sequence    
MEPVRFPVAA PAEIPAPAPA GSSADGQIYR PEASGGDKAQ GSEHSIEQLD PKTPGWMQRV  60
RVGAAAPGRP PCADRVTTLE KTVREFAEHP RDIVMMPKIG TSFDTLGEAY DFYNLYSWKK  120
GFGIRYRKSR LNVNRTKCMQ EIVCGCAGKP IVENTRSCRC ECPALIRLLR TKDNGWYIAE  180
HRDGHNHALS QTYGQTIHWP SHKHIDVYSK DLVKQLRQNN VNLSKVYSII GSFFGKMENV  240
PFTK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G06250.14e-10FAR1 family protein