PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC7BG063530.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family SBP
Protein Properties Length: 188aa    MW: 20582.5 Da    PI: 10.22
Description SBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC7BG063530.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SBP74.32.1e-232423777
                      TEEEEE-TTTSSEEETTT--SS--S-STTTT-------S-- CS
               SBP 37 gleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkq 77
                      g++qrfCqqCsrfh l+efDe+krsCrrrLa+hn+rrrk++
  TRIDC7BG063530.1  2 GKQQRFCQQCSRFHVLTEFDEAKRSCRRRLAEHNRRRRKPA 42
                      789************************************86 PP
Sequence ? help Back to Top
Protein Sequence    Length: 188 aa     Download sequence    
AGKQQRFCQQ CSRFHVLTEF DEAKRSCRRR LAEHNRRRRK PAAGTTATSS KDSAPPSKKP  60
NAGAISGSYT ADNNTLSTTK STISSNTSAI SFLQQGQARA VAATRPTTLT LGSSPERDDR  120
QQQLHNHQEQ QHFITSLLHN NINNSNILSC SSVSSSTMPS AATANGEVSN QNNDNANNNM  180
HMFEVDFM
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
12441KRSCRRRLAEHNRRRRKP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G33810.13e-10SBP family protein