PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC7BG063560.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family SBP
Protein Properties Length: 227aa    MW: 24740.1 Da    PI: 9.6253
Description SBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC7BG063560.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SBP109.81.7e-342651477
                      --HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S-- CS
               SBP 14 akeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkq 77
                      ak+yhrrhkvCe h+ka+ v+++g++qrfCqqCsrfh l+efDe+krsCr+rLa+hn+rrrk++
  TRIDC7BG063560.1  2 AKHYHRRHKVCEYHAKASLVAAAGKQQRFCQQCSRFHVLTEFDESKRSCRKRLAEHNRRRRKPA 65
                      79************************************************************86 PP
Sequence ? help Back to Top
Protein Sequence    Length: 227 aa     Download sequence    
GAKHYHRRHK VCEYHAKASL VAAAGKQQRF CQQCSRFHVL TEFDESKRSC RKRLAEHNRR  60
RRKPASSSTT ATSKDSAPPS KKPNPGAISS SYAADNNNLS ATKSNISSNT SAISCLQQHD  120
QSKAAAAAAR PMTLTLGEPP EKDDHHRQLS NAMQLHNHHQ EQQHFITSLL QGSNNNSNIL  180
SCSSVCSSGL PSAGAANGEV SDQNNNSNHG AGNNNNNNMH LFEVDFM
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
14764KRSCRKRLAEHNRRRRKP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G02065.14e-29SBP family protein