PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC7BG063560.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family SBP
Protein Properties Length: 192aa    MW: 20759.6 Da    PI: 8.6837
Description SBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC7BG063560.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SBP45.91.5e-141304877
                      SEEETTT--SS--S-STTTT-------S-- CS
               SBP 48 rfhelsefDeekrsCrrrLakhnerrrkkq 77
                      rfh l+efDe+krsCr+rLa+hn+rrrk++
  TRIDC7BG063560.2  1 RFHVLTEFDESKRSCRKRLAEHNRRRRKPA 30
                      8***************************86 PP
Sequence ? help Back to Top
Protein Sequence    Length: 192 aa     Download sequence    
RFHVLTEFDE SKRSCRKRLA EHNRRRRKPA SSSTTATSKD SAPPSKKPNP GAISSSYAAD  60
NNNLSATKSN ISSNTSAISC LQQHDQSKAA AAAARPMTLT LGEPPEKDDH HRQLSNAMQL  120
HNHHQEQQHF ITSLLQGSNN NSNILSCSSV CSSGLPSAGA ANGEVSDQNN NSNHGAGNNN  180
NNNMHLFEVD FM
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
11229KRSCRKRLAEHNRRRRKP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G20980.16e-08SBP family protein