PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC7BG065830.28
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family FAR1
Protein Properties Length: 181aa    MW: 20961.9 Da    PI: 8.8511
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC7BG065830.28genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR144.55.2e-1461140190
               FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 
                        +fYn Y+ e+GF +   ks+ +  +++ t+++ vC ++gk+e e+++         + r++C   +++ + +d+ w++t+ +++HnH+l+
  TRIDC7BG065830.28  61 DFYNLYSWEIGFGIGYGKSRLN-AQRTKTMQEIVCGCSGKTEAENSR---------SCRCECPVLIRLLRASDNSWYITEHRENHNHSLS 140
                        6*****************9998.45558999*********9987655.........8999999999999999***************996 PP
Sequence ? help Back to Top
Protein Sequence    Length: 181 aa     Download sequence    
MQLSFKTFAG CVLEVRRQTA RHVHRMTALE LTIRKYAEQP DKSVMRPALG LSFDSLGEAY  60
DFYNLYSWEI GFGIGYGKSR LNAQRTKTMQ EIVCGCSGKT EAENSRSCRC ECPVLIRLLR  120
ASDNSWYITE HRENHNHSLS LTMGEKVHCP SHKHIDVYTK DLIRQLRENN VNLGKEYTWK  180
N
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G52520.18e-11FAR1 family protein