PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC7BG065830.33
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family FAR1
Protein Properties Length: 242aa    MW: 27526.2 Da    PI: 8.032
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC7BG065830.33genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR143.69.8e-1436115190
               FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 
                        +fYn Y+ e+GF +   ks+ +  +++ t+++ vC ++gk+e e+++         + r++C   +++ + +d+ w++t+ +++HnH+l+
  TRIDC7BG065830.33  36 DFYNLYSWEIGFGIGYGKSRLN-AQRTKTMQEIVCGCSGKTEAENSR---------SCRCECPVLIRLLRASDNSWYITEHRENHNHSLS 115
                        6*****************9998.45558999*********9987655.........8999999999999999***************996 PP
Sequence ? help Back to Top
Protein Sequence    Length: 242 aa     Download sequence    
MTALELTIRK YAEQPDKSVM RPALGLSFDS LGEAYDFYNL YSWEIGFGIG YGKSRLNAQR  60
TKTMQEIVCG CSGKTEAENS RSCRCECPVL IRLLRASDNS WYITEHRENH NHSLSLTMGE  120
KVHCPSHKHI DVYTKDLIRQ LRENNVNLGK VYNIIGSFFG SVEKVPFTKR TLRNIRGKIN  180
REQADDDVQK TLETLVLRLD GLWDIQCGAA HSPTDQPLHS RNLHEAYICH EGVPGHIPHK  240
AS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G52520.11e-10FAR1 family protein