PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC7BG065830.35
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family FAR1
Protein Properties Length: 169aa    MW: 19648.3 Da    PI: 8.7888
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC7BG065830.35genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR144.74.4e-1449128190
               FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 
                        +fYn Y+ e+GF +   ks+ +  +++ t+++ vC ++gk+e e+++         + r++C   +++ + +d+ w++t+ +++HnH+l+
  TRIDC7BG065830.35  49 DFYNLYSWEIGFGIGYGKSRLN-AQRTKTMQEIVCGCSGKTEAENSR---------SCRCECPVLIRLLRASDNSWYITEHRENHNHSLS 128
                        6*****************9998.45558999*********9987655.........8999999999999999***************996 PP
Sequence ? help Back to Top
Protein Sequence    Length: 169 aa     Download sequence    
LEVRRQTARH VHRMTALELT IRKYAEQPDK SVMRPALGLS FDSLGEAYDF YNLYSWEIGF  60
GIGYGKSRLN AQRTKTMQEI VCGCSGKTEA ENSRSCRCEC PVLIRLLRAS DNSWYITEHR  120
ENHNHSLSLT MGEKVHCPSH KHIDVYTKDL IRQLRENNVN LGKEYTWKN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G52520.16e-11FAR1 family protein