PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC7BG065830.36

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

FAR1

Protein Properties

Length: 493aa MW: 55732.6 Da PI: 6.8263

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC7BG065830.36	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	41.8	3.4e-13	48	127	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 +fYn Y+ e+GF + ks+ + +++ t+++ vC ++gk+e e+++ + r++C +++ + +d+ w++t+ +++HnH+l+ TRIDC7BG065830.36 48 DFYNLYSWEIGFGIGYGKSRLN-AQRTKTMQEIVCGCSGKTEAENSR---------SCRCECPVLIRLLRASDNSWYITEHRENHNHSLS 127 6***************9998.45558999*****9987655.........8999999999999999*************996 PP

Sequence ? help Back to Top
Protein Sequence Length: 493 aa Download sequence
EVRRQTARHV HRMTALELTI RKYAEQPDKS VMRPALGLSF DSLGEAYDFY NLYSWEIGFG 60 IGYGKSRLNA QRTKTMQEIV CGCSGKTEAE NSRSCRCECP VLIRLLRASD NSWYITEHRE 120 NHNHSLSLTM GEKVHCPSHK HIDVYTKDLI RQLRENNVNL GKVYNIIGSF FGSVEKVPFT 180 KRTLRNIRGK INREQADDDV QKTLESDLKN CDVFFICWVS GLLKFDLTSV VLLLLHVSQP 240 WFFDWMDYGT YNVEQHTVPR ISLYTAEICT RLIYVTREYP DIFPTKPHDE FDHLDEDWHD 300 VVGEPGGILQ HEGQREALRA AEALIAAIQQ DCTTPEGRRG KQGAGGDTDT NTLNDKGKGV 360 ADESSDSSSS DSDDERVDPS IRLARPILRA DRRGESIDAP PTSVRIPGVV GGNRVTGPRS 420 LNRFRQRLLV GSNNTRGAAA SNASALVVNP DRHALLRSRG EHLRAELSEI EAQAKSDLEY 480 QNWFMAIRDV MPT

Sequence ? help Back to Top

Protein Sequence Length: 493 aa Download sequence

EVRRQTARHV HRMTALELTI RKYAEQPDKS VMRPALGLSF DSLGEAYDFY NLYSWEIGFG  60
IGYGKSRLNA QRTKTMQEIV CGCSGKTEAE NSRSCRCECP VLIRLLRASD NSWYITEHRE  120
NHNHSLSLTM GEKVHCPSHK HIDVYTKDLI RQLRENNVNL GKVYNIIGSF FGSVEKVPFT  180
KRTLRNIRGK INREQADDDV QKTLESDLKN CDVFFICWVS GLLKFDLTSV VLLLLHVSQP  240
WFFDWMDYGT YNVEQHTVPR ISLYTAEICT RLIYVTREYP DIFPTKPHDE FDHLDEDWHD  300
VVGEPGGILQ HEGQREALRA AEALIAAIQQ DCTTPEGRRG KQGAGGDTDT NTLNDKGKGV  360
ADESSDSSSS DSDDERVDPS IRLARPILRA DRRGESIDAP PTSVRIPGVV GGNRVTGPRS  420
LNRFRQRLLV GSNNTRGAAA SNASALVVNP DRHALLRSRG EHLRAELSEI EAQAKSDLEY  480
QNWFMAIRDV MPT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G52520.1	1e-09	FAR1 family protein

Link Out ? help Back to Top
Ensembl	TRIDC7BG065830.36