PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC7BG066980.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

G2-like

Protein Properties

Length: 417aa MW: 46678.8 Da PI: 7.3169

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC7BG066980.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	79.3	4.8e-25	43	97	1	56
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRla 56 kpr+ Wt LH++F+ea++++ G ++A+Pk++lelm+v+ L++e+++SHLQkYRl+ TRIDC7BG066980.1 43 KPRMTWTIALHNKFLEAINRI-GLDRAVPKKVLELMNVDYLSRENIASHLQKYRLH 97 79*****************.******************************97 PP
2	Myb_DNA-binding	25.7	2.6e-08	45	95	1	48
TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 r+ WT ++ ++++a+++ G + +k++ + m+ ++++++ s++qky+ TRIDC7BG066980.1 45 RMTWTIALHNKFLEAINRIGLDraVPKKVLELMNvDYLSRENIASHLQKYR 95 789******************************999**********7 PP

Sequence ? help Back to Top
Protein Sequence Length: 417 aa Download sequence
DNDVQRVQPA TTNKSKYSGN KRNGGDDSSK NNEGTHISAI HRKPRMTWTI ALHNKFLEAI 60 NRIGLDRAVP KKVLELMNVD YLSRENIASH LQKYRLHLKK VKSNPSGDAY ERWNSSYNMN 120 NKGNFMHNHE HGRWSVSSGG TASWSTNKYG STDHLAPPMN IQSNFYMGSY LHDGRMPKYV 180 GELPSDARRF TGFADPPVSQ YDNIPNEIMS DEFPSFNYSN SRRDIMRGKL MEISKGKTPS 240 NLQSSFANTT IGGGRSLVAS QVNFPHSNQL ESYATSSGRL PLQNEKAPFI SNTTSMGCFT 300 ERLAPFNMAS NISSVGTMWN GSSALDASRT STNDTHLVNS ERTTLMLHNL QTDDFISLTR 360 LHDGGDRASI FPMQEGTLNQ QPLIDHLNEI NAFSMDDMFS NMHVEDFTGD VAIMEEA

Sequence ? help Back to Top

Protein Sequence Length: 417 aa Download sequence

DNDVQRVQPA TTNKSKYSGN KRNGGDDSSK NNEGTHISAI HRKPRMTWTI ALHNKFLEAI  60
NRIGLDRAVP KKVLELMNVD YLSRENIASH LQKYRLHLKK VKSNPSGDAY ERWNSSYNMN  120
NKGNFMHNHE HGRWSVSSGG TASWSTNKYG STDHLAPPMN IQSNFYMGSY LHDGRMPKYV  180
GELPSDARRF TGFADPPVSQ YDNIPNEIMS DEFPSFNYSN SRRDIMRGKL MEISKGKTPS  240
NLQSSFANTT IGGGRSLVAS QVNFPHSNQL ESYATSSGRL PLQNEKAPFI SNTTSMGCFT  300
ERLAPFNMAS NISSVGTMWN GSSALDASRT STNDTHLVNS ERTTLMLHNL QTDDFISLTR  360
LHDGGDRASI FPMQEGTLNQ QPLIDHLNEI NAFSMDDMFS NMHVEDFTGD VAIMEEA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G58080.1	3e-23	ARR-B family protein

Link Out ? help Back to Top
Ensembl	TRIDC7BG066980.1