PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC7BG068610.2

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

NF-X1

Protein Properties

Length: 1090aa MW: 117439 Da PI: 7.9894

Description

NF-X1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC7BG068610.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-NF-X1	18	6.3e-06	401	418	1	18
zf-NF-X1 1 CGkHkCqklCHeGpCppC 18 CG H+C+ +CHeG+CppC TRIDC7BG068610.2 401 CGLHRCKGTCHEGECPPC 418 ****************** PP
2	zf-NF-X1	16.5	1.8e-05	606	622	1	17
zf-NF-X1 1 CGkHkCqklCHeGpCpp 17 CG H C ++CH+ pC+p TRIDC7BG068610.2 606 CGLHACARPCHPSPCDP 622 ***************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 1090 aa Download sequence
XXXXXXXXXX XXXXXXXYAP PHHRDSAAPL LPLPNPNPNP APDSRPPPRR QRRPNHNNGR 60 APPPQERAPP SAPAANAPAP APAAAAAGGG AVPQLVQEIQ DKLARGAVEC MICYDMVRRS 120 APVWSCGSCF SIFHLPCIRR WARSPASASD DPASDAWRCP GCQSVQDVPA RDIAYTCFCR 180 RRRDPPNDLY LTPHSCGEPC SKPLDRADPA AAKGNDDDDV AARCPHACVL QCHPGPCPPC 240 KAFAPERPCP CGKQSITRRC ADRSTPVTCG QPCEKLLPCR RHRCDKVCHT GPCGECEVDY 300 PAQCFCGKKT ETLLCGEMVL KGKLSDKDGV FSCSEVCGHN LACANHACQD VCHPGPCGEC 360 ELVPEKVTTC HCGKTRLQEK RTSCLDPIAT CDKVCDKRLP CGLHRCKGTC HEGECPPCLV 420 RVEQRCRCGS SGQMVECYKV SKEEFRCNKP CGRKKNCGRH RCSECCCPLS KPFAQHQGDS 480 MDPHFCQIPC GKKLRCGQHG CQHLCHSGHC DPCRETIFND LTCACGRSSI PPPQPCGTPT 540 PSCPHQCIVP QPCGHPASHQ CHFGDCPPCV VPVMRECVGG HVMLRNIPCG SKDIRCNQPC 600 GKNRQCGLHA CARPCHPSPC DPPPANGEAS SGSGGKVSCG QLCGVPRREC KHTCNAPCHP 660 SSPCPDVRCE HRATITCSCG RISTTVPCSA GGAYNGDSTF DISVMQQLPM ALQPVESNGK 720 RVPLGQRKLC CDEECAKVER KRVLAEAFDI TPPNLDALHF GENSNASDLV SDLFRREPKW 780 VLAIEERCKF LVLGKTRGNS SSNMKFHVFC PMLKDKRDAI RLIADRWKLS VQAVGWEPKR 840 FVTVHVTPKS KVPARVLGSK PGVPVSAAHP YFDSMVDMDP RLVVAMLDLP RDADVNSLVL 900 RFGGECELVW LNDKNAAAVF SDPARAATAL RRLDYGSAYQ GAAMFCPSSI TQASLSSNVW 960 VGAPRDGGLA TASSASAWKK DSPSELKPNP HAVMTVLGRA PGTSVLGHSP GSVWKPAVQV 1020 TSSNRWNALE PDAATSSGPA DKPKPPPHTD AGSSTSAPRV GAGSSAEPSA GQSVSKLQPD 1080 IEVEDWEEIE

Sequence ? help Back to Top

Protein Sequence Length: 1090 aa Download sequence

XXXXXXXXXX XXXXXXXYAP PHHRDSAAPL LPLPNPNPNP APDSRPPPRR QRRPNHNNGR  60
APPPQERAPP SAPAANAPAP APAAAAAGGG AVPQLVQEIQ DKLARGAVEC MICYDMVRRS  120
APVWSCGSCF SIFHLPCIRR WARSPASASD DPASDAWRCP GCQSVQDVPA RDIAYTCFCR  180
RRRDPPNDLY LTPHSCGEPC SKPLDRADPA AAKGNDDDDV AARCPHACVL QCHPGPCPPC  240
KAFAPERPCP CGKQSITRRC ADRSTPVTCG QPCEKLLPCR RHRCDKVCHT GPCGECEVDY  300
PAQCFCGKKT ETLLCGEMVL KGKLSDKDGV FSCSEVCGHN LACANHACQD VCHPGPCGEC  360
ELVPEKVTTC HCGKTRLQEK RTSCLDPIAT CDKVCDKRLP CGLHRCKGTC HEGECPPCLV  420
RVEQRCRCGS SGQMVECYKV SKEEFRCNKP CGRKKNCGRH RCSECCCPLS KPFAQHQGDS  480
MDPHFCQIPC GKKLRCGQHG CQHLCHSGHC DPCRETIFND LTCACGRSSI PPPQPCGTPT  540
PSCPHQCIVP QPCGHPASHQ CHFGDCPPCV VPVMRECVGG HVMLRNIPCG SKDIRCNQPC  600
GKNRQCGLHA CARPCHPSPC DPPPANGEAS SGSGGKVSCG QLCGVPRREC KHTCNAPCHP  660
SSPCPDVRCE HRATITCSCG RISTTVPCSA GGAYNGDSTF DISVMQQLPM ALQPVESNGK  720
RVPLGQRKLC CDEECAKVER KRVLAEAFDI TPPNLDALHF GENSNASDLV SDLFRREPKW  780
VLAIEERCKF LVLGKTRGNS SSNMKFHVFC PMLKDKRDAI RLIADRWKLS VQAVGWEPKR  840
FVTVHVTPKS KVPARVLGSK PGVPVSAAHP YFDSMVDMDP RLVVAMLDLP RDADVNSLVL  900
RFGGECELVW LNDKNAAAVF SDPARAATAL RRLDYGSAYQ GAAMFCPSSI TQASLSSNVW  960
VGAPRDGGLA TASSASAWKK DSPSELKPNP HAVMTVLGRA PGTSVLGHSP GSVWKPAVQV  1020
TSSNRWNALE PDAATSSGPA DKPKPPPHTD AGSSTSAPRV GAGSSAEPSA GQSVSKLQPD  1080
IEVEDWEEIE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G10170.1	0.0	NF-X1 family protein

Link Out ? help Back to Top
Ensembl	TRIDC7BG068610.2