PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC7BG068920.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

NF-X1

Protein Properties

Length: 1081aa MW: 116913 Da PI: 8.0764

Description

NF-X1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC7BG068920.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-NF-X1	21.1	6.8e-07	341	358	1	18
zf-NF-X1 1 CGkHkCqklCHeGpCppC 18 CG+H Cq CH+GpC++C TRIDC7BG068920.1 341 CGNHACQDVCHPGPCGEC 358 ****************** PP
2	zf-NF-X1	20.6	9.8e-07	399	416	1	18
zf-NF-X1 1 CGkHkCqklCHeGpCppC 18 CG H+C+ CHeG+CppC TRIDC7BG068920.1 399 CGVHRCKVACHEGECPPC 416 ****************** PP

Sequence ? help Back to Top
Protein Sequence Length: 1081 aa Download sequence
XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XQRRPNRHNN GPAPPPQERA 60 PPSGPANSPV PAPAPVAAAA AAGGGPVPQL VQEIQDKLAR GAVECMICYD MVRRSAPVWS 120 CGSCFSIFHL PCIRKWARSP ASVSDASAPA SDAWRCPGCQ SVQDVRARDI AYTCFCRRRR 180 DPPNDLFLTP HSCGEPCSKP LGKADPAAST KGGDDDDVAT RCPHVCVLQC HPGPCPPCKA 240 FAPERPCPCG KQSITRRCAD RSTPVTCGQR CEKLLPCRRH RCEKVCHTGP CGDCEVNFPA 300 QCFCGKKTET LLCGEMVLKG KLSDKDGVFS CSEVCSHNLA CGNHACQDVC HPGPCGECEL 360 LPGKVTTCHC GKTRLQEKRA SCLDPIPTCD KVCDKRLPCG VHRCKVACHE GECPPCLVRV 420 EQRCRCGSSG QMVECYKVLK EEFRCNKPCG RKKNCGRHRC SELCCPLSKP FAQHQGDSMD 480 PHFCQIPCGK KLRCGQHGCQ HLCHSGHCDP CRETIFHDLT CACGRTSIPP PQPCGTPTPS 540 CPHQCMVPQP CGHPASHQCH FGDCPPCVVP VTRECVGGHV MLRNIPCGSK DIRCNQPCGK 600 NRQCGLHACA RTCHPAPCDP PPANGEASSS SGGKVSCGQL CGVPRRECKH TCNAPCHPSS 660 PCPDVRCEHR VTIACSCGRI TTAVPCSAGG AYNGDSAFDI SVMQQLPMPL QPVESNGKRV 720 PVGQRKLCCD EECAKMERKR VLAEAFDITP PNLDALHFGE NSNASDLLSD LFRREPKWVL 780 AIEERCKFLV LGKTKGNSSS NIKFHVFCHM MKDKRDAIRL IADRWKLSVQ GVGWEPKRFI 840 TVHVTPKSKV PARVLGSKPG VPVSASHPYF DPMVDMDPRL VVAMLDLPRD ADVSSLVLRF 900 GGECELVWLN DKNAAAVFSD PARAATALRR LDYGSAYQGA AMFCPSSITQ ASVSSNVWVG 960 AQRDGGLAAK SSANPWKASQ FEPDPSGDWT VLSHASGSVW KRGDTPAQVM GSSNRWNALE 1020 SDAATSSGPT DKRKPPLRTE TGSSSSAPRV GAGSSAAPSA GQSVSKLQPD VEVEDWEESC 1080 E

Sequence ? help Back to Top

Protein Sequence Length: 1081 aa Download sequence

XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XQRRPNRHNN GPAPPPQERA  60
PPSGPANSPV PAPAPVAAAA AAGGGPVPQL VQEIQDKLAR GAVECMICYD MVRRSAPVWS  120
CGSCFSIFHL PCIRKWARSP ASVSDASAPA SDAWRCPGCQ SVQDVRARDI AYTCFCRRRR  180
DPPNDLFLTP HSCGEPCSKP LGKADPAAST KGGDDDDVAT RCPHVCVLQC HPGPCPPCKA  240
FAPERPCPCG KQSITRRCAD RSTPVTCGQR CEKLLPCRRH RCEKVCHTGP CGDCEVNFPA  300
QCFCGKKTET LLCGEMVLKG KLSDKDGVFS CSEVCSHNLA CGNHACQDVC HPGPCGECEL  360
LPGKVTTCHC GKTRLQEKRA SCLDPIPTCD KVCDKRLPCG VHRCKVACHE GECPPCLVRV  420
EQRCRCGSSG QMVECYKVLK EEFRCNKPCG RKKNCGRHRC SELCCPLSKP FAQHQGDSMD  480
PHFCQIPCGK KLRCGQHGCQ HLCHSGHCDP CRETIFHDLT CACGRTSIPP PQPCGTPTPS  540
CPHQCMVPQP CGHPASHQCH FGDCPPCVVP VTRECVGGHV MLRNIPCGSK DIRCNQPCGK  600
NRQCGLHACA RTCHPAPCDP PPANGEASSS SGGKVSCGQL CGVPRRECKH TCNAPCHPSS  660
PCPDVRCEHR VTIACSCGRI TTAVPCSAGG AYNGDSAFDI SVMQQLPMPL QPVESNGKRV  720
PVGQRKLCCD EECAKMERKR VLAEAFDITP PNLDALHFGE NSNASDLLSD LFRREPKWVL  780
AIEERCKFLV LGKTKGNSSS NIKFHVFCHM MKDKRDAIRL IADRWKLSVQ GVGWEPKRFI  840
TVHVTPKSKV PARVLGSKPG VPVSASHPYF DPMVDMDPRL VVAMLDLPRD ADVSSLVLRF  900
GGECELVWLN DKNAAAVFSD PARAATALRR LDYGSAYQGA AMFCPSSITQ ASVSSNVWVG  960
AQRDGGLAAK SSANPWKASQ FEPDPSGDWT VLSHASGSVW KRGDTPAQVM GSSNRWNALE  1020
SDAATSSGPT DKRKPPLRTE TGSSSSAPRV GAGSSAAPSA GQSVSKLQPD VEVEDWEESC  1080
E

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G10170.1	0.0	NF-X1 family protein

Link Out ? help Back to Top
Ensembl	TRIDC7BG068920.1