PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC7BG070020.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

MYB

Protein Properties

Length: 297aa MW: 31871.3 Da PI: 8.3143

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC7BG070020.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	53.4	6.1e-17	10	55	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg+W++eEd l ++v+ +G ++W++I r ++ gR++k+c++rw + TRIDC7BG070020.1 10 RGPWSPEEDAALRRLVECHGARNWTAIGRGVP-GRSGKSCRLRWCNQ 55 89****************************.*********985 PP
2	Myb_DNA-binding	53.2	6.7e-17	62	104	1	45
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 r ++T++Ed ++++a+++lG++ W++Iar++ gRt++ +k++w+ TRIDC7BG070020.1 62 RRPFTADEDTIIARAHARLGNR-WAAIARHLR-GRTDNAVKNHWN 104 679*****************.*****.*********8 PP

Sequence ? help Back to Top
Protein Sequence Length: 297 aa Download sequence
PAMEGCDRIR GPWSPEEDAA LRRLVECHGA RNWTAIGRGV PGRSGKSCRL RWCNQLSPGV 60 ERRPFTADED TIIARAHARL GNRWAAIARH LRGRTDNAVK NHWNCSLKRR LGAVDVAGEG 120 EEERPSKRAS VTPESTSGSG SGSGSGSNRS DLSHGGAFGL GQVYRPVARA GGFEPADCAM 180 SQRHEEEEQE DPFTSLSLSL PGTDAHAFHH DSSRSHFHQP SPSPSPPPAP ASTTAPPASS 240 YPFSPAFAAA MQEMIRDEVR RYISGVSCGA NLPSMSQLLD GVMRAAVERA GGVSRMQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G50060.1	6e-57	MYB family protein

Link Out ? help Back to Top
Ensembl	TRIDC7BG070020.1