PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC7BG070030.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

MYB

Protein Properties

Length: 302aa MW: 32492.1 Da PI: 7.0348

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC7BG070030.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	55.5	1.3e-17	12	57	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg+W++eEd l ++v+ +G ++W++I r ++ gR++k+c++rw + TRIDC7BG070030.1 12 RGPWSPEEDGALRQLVEHHGARNWTAIGRGVP-GRSGKSCRLRWCNQ 57 89****************************.*********985 PP
2	Myb_DNA-binding	49.8	8.1e-16	64	106	1	45
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 r ++T++Ed +++a+++lG++ W++Iar + gRt++ +k++w+ TRIDC7BG070030.1 64 RRPFTADEDAAIARAHARLGNR-WAAIARLLR-GRTDNAVKNHWN 106 679*****************.*****.*********8 PP

Sequence ? help Back to Top
Protein Sequence Length: 302 aa Download sequence
DSYKMEGCER IRGPWSPEED GALRQLVEHH GARNWTAIGR GVPGRSGKSC RLRWCNQLSP 60 GVERRPFTAD EDAAIARAHA RLGNRWAAIA RLLRGRTDNA VKNHWNCSLK RRLGDLGADG 120 VAEGDQEERP CKRASFTPES TSGSGSGSGS GSDRSDLSHG GVFALGQVYR PVARAGGFEP 180 ADCAMSQRHE EEEQEDPFTS LSLSLPGTDA HAFHHDISTS RFHEPSPSPS PPPAPASATA 240 PPASSYPFSP EFAALMQEMI RDEVCRYISG VSCGANLPSM PQLVNGVMRA AAERAGGVSM 300 MR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G50060.1	1e-51	MYB family protein

Link Out ? help Back to Top
Ensembl	TRIDC7BG070030.1