PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC7BG072180.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

C2H2

Protein Properties

Length: 120aa MW: 12909.2 Da PI: 7.6799

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC7BG072180.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	13.1	0.00029	34	54	3	23
ETTTTEEESSHHHHHHHHHHT CS zf-C2H2 3 CpdCgksFsrksnLkrHirtH 23 C +C++ F+++ L H++ H TRIDC7BG072180.1 34 CVHCDRKFRSSQALGGHQNAH 54 ******************988 PP

Sequence ? help Back to Top
Protein Sequence Length: 120 aa Download sequence
MERASSSQDD ELSLELTLAA VAPAPGTTDG FFLCVHCDRK FRSSQALGGH QNAHKQERAI 60 AKHRREAAPA ATRAQKSRSS KAERHAATST RMPEPADGKQ GGSSSKHGDD DDEVDLSLRL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G57520.1	6e-12	C2H2 family protein

Link Out ? help Back to Top
Ensembl	TRIDC7BG072180.1