PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019149741.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family ERF
Protein Properties Length: 360aa    MW: 40128.2 Da    PI: 4.463
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019149741.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP261.61.8e-19125174255
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                     +++GVr+++ +g+W+AeIrdp     r  r +lg+++taeeAa  +++a+ kl+g
  XP_019149741.1 125 KFRGVRQRP-WGKWAAEIRDPA----RrVRLWLGTYDTAEEAAMVYDNAAIKLRG 174
                     89*******.**********82....35*************************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 360 aa     Download sequence    
MDHSMFCPIK YTEHRNVIKQ LLKPCAAALK PSKLPEGPRT IRVTVTDPDA TDSSSDEEEE  60
ELFGRQRVKR YIHEIHIERA AAKAGVDGNG RNGKKKTAEG VHAKQKAVKN KEVPVSSGAA  120
GGVRKFRGVR QRPWGKWAAE IRDPARRVRL WLGTYDTAEE AAMVYDNAAI KLRGPDALTN  180
FTTPPAAKES TEINANATSN SGYDSADESR NLSSPTSVLR FRTSQSSEES EQPNECPVPD  240
YMETDQIREP ESCHYATPPE IQECHGETTV IPDYTNEYLP TDIPFIDNFF DYQSLEQTLF  300
DDTPSFEDVA VNQFANDFFS DDFGVFNDTT FQDLGTLDVN VDDYFQDCGD FSGVDAVLAV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G27950.12e-60ERF family protein