PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_019150000.1

Organism

Ipomoea nil

Taxonomic ID

35883

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea

Family

bZIP

Protein Properties

Length: 196aa MW: 22616.4 Da PI: 6.0844

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_019150000.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	47.1	5e-15	82	140	5	63
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 +++rr+++NRe+ArrsR RK+ ++eL+ v L +eN+ L ++l++ ++ +k+ +e+ XP_019150000.1 82 RKQRRMISNRESARRSRMRKQRHLDELRSQVFHLRTENHNLLDKLNQVSDCHDKVLQEN 140 689*********************************************99999988887 PP

Sequence ? help Back to Top
Protein Sequence Length: 196 aa Download sequence
MISSEITGIN YVAADNPLPL PLDYSFMPND IPALHFSKFI TNWANYQTTL PFPEFPAPLS 60 CVSNNSTSDE SDEHQLRIIG ERKQRRMISN RESARRSRMR KQRHLDELRS QVFHLRTENH 120 NLLDKLNQVS DCHDKVLQEN ACLKEEASGL RQMVMELQLR SPFSDLGELE EITCTTDHLK 180 TEPSNQTNSS SINMFH

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	95	102	RRSRMRKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G30530.1	2e-46	bZIP family protein