PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019150577.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family B3
Protein Properties Length: 180aa    MW: 20728.5 Da    PI: 9.1839
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019150577.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B338.71.8e-128663393
                    -SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..E CS
              B3 33 sktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelv 93
                    +++++l+++  ++W+++++y++    ++++ GW +Fvk+n    gD++vF +d+ + f ++
  XP_019150577.1  8 QRKVVLRNRMKKVWNIEITYTGDC--CFFKHGWAKFVKDNSFINGDTLVFIYDHPTVFDFF 66
                    568***************666665..789**********************9987766554 PP
Sequence ? help Back to Top
Protein Sequence    Length: 180 aa     Download sequence    
MEPRKRYQRK VVLRNRMKKV WNIEITYTGD CCFFKHGWAK FVKDNSFING DTLVFIYDHP  60
TVFDFFVLDS SGCEKIIIEG EEARVKGLKN NNGNDVNFQD NAFLVEFDVN IVTQVRKDED  120
EIDVEEENND SFLNLGGSKR AAKEKKRDVS PKKGNVDLGK KDARAKKRDV SKKQGCKNPA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G34400.12e-07B3 family protein