PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019150580.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family B3
Protein Properties Length: 247aa    MW: 28808.9 Da    PI: 10.1979
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019150580.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B336.87e-124632990
                    -..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE CS
              B3 29 kkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsef 90
                    +k+ +++++l+++  ++W++++  + +++ ++++ GW +Fv++n    gD++vF +d+   f
  XP_019150580.1  4 EKRYPRKVVLRNRMKKVWNIEI--TDTGDCCFFKHGWTKFVEDNSFINGDTLVFIYDHPAVF 63
                    5667889***************..9999999************************9875555 PP
Sequence ? help Back to Top
Protein Sequence    Length: 247 aa     Download sequence    
MELEKRYPRK VVLRNRMKKV WNIEITDTGD CCFFKHGWTK FVEDNSFING DTLVFIYDHP  60
AVFDFFVLDS SGCEKIIIEG EEARVKGLKN NNGNDVNFQD NAFLVEFDVN IVTQVKKDED  120
EMDVEEENND VGFQYHTSRS KRKRSITERG SKRAAREKKR DASPKKGNDG LGKKDARAKK  180
RDVSKKKKNV SVIKKRDVRD HFGVELFSSG RFAQPKNPYF VIKIRPRRPS DLYRDLLLFV  240
LQLHLKA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G66980.17e-09B3 family protein