PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019151226.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family WRKY
Protein Properties Length: 320aa    MW: 35726.7 Da    PI: 4.6382
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019151226.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY901.9e-28143201259
                     --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                     +D+++WrKYGqK++kgs++prsYYrC+s+ gC ++k+ve+s++   ++++tY+ eH h+
  XP_019151226.1 143 EDKWAWRKYGQKPIKGSPYPRSYYRCSSSkGCLARKQVEQSNSAAGMFIVTYTAEHSHS 201
                     8**************************998****************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 320 aa     Download sequence    
MGECIGFEDN WGLQAIVQQP PLMASSEFTL QSCHDYLFDF SQENVLNFDD FVRTAMVPDD  60
ALLEELYKPF IQPAASISFT GEVKQEAAVH QMQQQQDGDV KKSGLDKSSP VLEAPNNYVP  120
KFKRRKNEHK RVVVQVPAEE LCEDKWAWRK YGQKPIKGSP YPRSYYRCSS SKGCLARKQV  180
EQSNSAAGMF IVTYTAEHSH SQPTRRNSLA GTIRNKFPPA VKAAAEDSTA HHVPELVAAS  240
SALSSPTANN WRAGSEIKDE DDDDEELGEK MQVVEMSDQS GVSQVAMDNE DFFAGLEDLD  300
GLISYFSYSS QCNYPSMFSS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G52830.12e-32WRKY family protein