PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019151863.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family C2H2
Protein Properties Length: 203aa    MW: 22050.6 Da    PI: 7.1644
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019151863.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H215.35.7e-05122144123
                     EEETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                     ++C++Cg  Fs+   L  H+r+H
  XP_019151863.1 122 HECSYCGAEFSSGQALGGHMRRH 144
                     78********************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 203 aa     Download sequence    
MITDTTPPHS SATSEPIPAA PTPEDEDMAR CLMLLSQGGG VSRHPPAIPK SPLYKEEESG  60
CGSKFCSKKP LTTVEAAAVK RPLSLYDEED INPYPFNKTP KISPPFSSLH FYDSAKSSPR  120
THECSYCGAE FSSGQALGGH MRRHRNSTAA TAASQLSPSS SSFEKRVLQK EENNGKGLNL  180
DLNLLPAGED NQDHRRAREP IVK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G28200.14e-17C2H2 family protein