PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019151996.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family ERF
Protein Properties Length: 177aa    MW: 19163.3 Da    PI: 4.9753
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019151996.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP261.32.1e-191666155
             AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                    s y+GVr ++ +g+Wv+eIr+p   gk++r++lg+f tae+Aa a++aa++ l+g
  XP_019151996.1 16 SPYRGVRKRR-WGKWVSEIREP---GKKTRIWLGSFTTAEMAAVAYDAAALHLRG 66
                    68*****887.**********8...557*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 177 aa     Download sequence    
MDGNTGGRAG GGAMSSPYRG VRKRRWGKWV SEIREPGKKT RIWLGSFTTA EMAAVAYDAA  60
ALHLRGPLAR LNFPSRAQAL PRPASSSPED IRLAGQEAAS QLEQSMRDTQ GASGSGMSNV  120
PPVTIGLSQS QIQAINDIPL GSPKVWDGMT NESMFFSNDY EMMSDNEDQV DDSLWDP
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1612GGRAGGG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G71450.11e-44ERF family protein