PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019152005.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family S1Fa-like
Protein Properties Length: 87aa    MW: 9680.5 Da    PI: 10.2543
Description S1Fa-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019152005.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1S1FA1261.1e-392087370
            S1FA  3 vakveakGlnPGlivllvvgglllvflvgnyilyvyaqknlPPrkkkPvskkklkreklkqGvavPGe 70
                    ++ v  kGlnPGlivllv+ggl+l flvgny ly+yaqk+l P+kkkPvskkk+kre+lkqGv++PGe
  XP_019152005.1 20 KNVVTGKGLNPGLIVLLVIGGLVLAFLVGNYFLYMYAQKTLGPKKKKPVSKKKMKRERLKQGVSAPGE 87
                    566778*************************************************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 87 aa     Download sequence    
MDYEEEFADQ HVPPSFDPMK NVVTGKGLNP GLIVLLVIGG LVLAFLVGNY FLYMYAQKTL  60
GPKKKKPVSK KKMKRERLKQ GVSAPGE